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  Home > Genomes > Escherichia coli K-12 subMG1655 > gi|16131140|ref|NP_417718.1|

Domain assignment for gi|16131140|ref|NP_417718.1| from Escherichia coli K-12 subMG1655

Domain architecture

Domain assignment details

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Strong hits

Sequence:  gi|16131140|ref|NP_417718.1|
Domain Number 1 Region: 403-644
Classification Level Classification E-value
Superfamily EAL domain-like 1.58e-34
Family EAL domain 0.0086
Further Details:      
 
Domain Number 2 Region: 230-388
Classification Level Classification E-value
Superfamily Nucleotide cyclase 1.6e-23
Family GGDEF domain 0.0014
Further Details:      
 

Protein sequence

External link(s) gi|16131140|ref|NP_417718.1|
Sequence length 646
Comment conserved inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
Sequence 
MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV
LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR
LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER
GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN
QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT
EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL
AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG
VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV
Download sequence
Identical sequences A8A561 B1IQ40 B1XHM2 P13518
gi|254163188|ref|YP_003046296.1| gi|238902352|ref|YP_002928148.1| gi|170082781|ref|YP_001732101.1| gi|253771918|ref|YP_003034749.1| gi|89110013|ref|AP_003793.1| gi|157162730|ref|YP_001460048.1| 1413S YHDA_ECOLI gi|170018505|ref|YP_001723459.1| gi|251786514|ref|YP_003000818.1|

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2001-2010 The Medical Research Council and the SUPERFAMILY authors; Derek Wilson, Martin Madera and Julian Gough.